Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar protein flag | VSVS12_RS11400 | Q56704 | Negative | 2540811 - 2541239 | 15713.3 |
| flagellin | VSVS12_RS11405 | A5F6C4 | Negative | 2541314 - 2542447 | 39723.9 |
| flagellin | VSVS12_RS11410 | Q56571 | Negative | 2542689 - 2543831 | 39799.0 |
| flagellin | VSVS12_RS11415 | Q56570 | Negative | 2544135 - 2545268 | 40462.2 |
| dyp-type peroxidase | VSVS12_RS11420 | P76536 | Negative | 2545413 - 2546315 | 33493.2 |
| duf2919 domain-containing protein | VSVS12_RS11425 | P76538 | Negative | 2546384 - 2546848 | 17561.7 |
| heme lyase nrfefg subunit nrff | VSVS12_RS11430 | P44942 | Negative | 2546999 - 2547472 | 17993.8 |
| dsbe family thiol:disulfide interchange protein | VSVS12_RS11435 | Q9CPK9 | Negative | 2547485 - 2548009 | 19382.5 |
| heme lyase ccmf/nrfe family subunit | VSVS12_RS11440 | P44944 | Negative | 2547987 - 2549906 | 71055.9 |
| cytochrome c nitrite reductase subunit nrfd | VSVS12_RS11445 | P32709 | Negative | 2549910 - 2550881 | 36036.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



