Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar assembly protein flih | VSVS12_RS11350 | Not Available | Negative | 2529684 - 2530484 | 29940.9 |
| flagellar motor switch protein flig | VSVS12_RS11355 | Q9X4Q9 | Negative | 2530511 - 2531566 | 38677.4 |
| flagellar basal-body ms-ring/collar protein flif | VSVS12_RS11360 | Q51463 | Negative | 2531559 - 2533304 | 63859.7 |
| flagellar hook-basal body complex protein flie | VSVS12_RS11365 | A4VMP0 | Negative | 2533319 - 2533630 | 11275.5 |
| sigma-54 dependent transcriptional regulator | VSVS12_RS11370 | Q9I4N3 | Negative | 2533729 - 2535135 | 51377.1 |
| pas domain-containing sensor histidine kinase | VSVS12_RS11375 | Q9I4N4 | Negative | 2535137 - 2536171 | 37763.5 |
| sigma-54 dependent transcriptional regulator | VSVS12_RS11380 | G3XCV0 | Negative | 2536302 - 2537768 | 54614.7 |
| flagellar export chaperone flis | VSVS12_RS11385 | Q9KQ65 | Negative | 2538021 - 2538431 | 14975.2 |
| flagellar rod protein flai | VSVS12_RS11390 | Not Available | Negative | 2538444 - 2538767 | 12551.0 |
| flagellar filament capping protein flid | VSVS12_RS11395 | Q9KQ63 | Negative | 2538751 - 2540790 | 73994.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



