Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yfcl family protein | VSVS12_RS11245 | P64541 | Negative | 2510781 - 2511044 | 9628.3 |
| tetratricopeptide repeat protein | VSVS12_RS11250 | Not Available | Negative | 2511154 - 2512131 | 36476.2 |
| lruc domain-containing protein | VSVS12_RS11255 | Not Available | Positive | 2512297 - 2514441 | 76989.2 |
| hypothetical protein | VSVS12_RS11260 | Not Available | Positive | 2514452 - 2514925 | 16651.5 |
| elongation factor p hydroxylase | VSVS12_RS11265 | P76938 | Negative | 2515031 - 2515561 | 20130.8 |
| trimeric intracellular cation channel family protein | VSVS12_RS11270 | P0AGM3 | Positive | 2515795 - 2516418 | 22261.1 |
| chorismate synthase | VSVS12_RS11275 | Q7MIT1 | Negative | 2516517 - 2517602 | 38983.3 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | VSVS12_RS11280 | P39200 | Negative | 2517792 - 2518724 | 35285.1 |
| endonuclease smrb | VSVS12_RS11285 | Q87MM7 | Positive | 2518798 - 2519328 | 19944.9 |
| flagellar biosynthesis protein flhb | VSVS12_RS11295 | P40727 | Negative | 2520425 - 2521555 | 42118.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



