Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | VSVS12_RS10990 | Not Available | Positive | 2449586 - 2450161 | 22445.7 |
| duf3379 domain-containing protein | VSVS12_RS10995 | Not Available | Positive | 2450154 - 2450885 | 26773.0 |
| outer membrane protein transport protein | VSVS12_RS11000 | Q8Z4Y8 | Positive | 2451171 - 2452469 | 46842.2 |
| outer membrane protein transport protein | VSVS12_RS11005 | Q8CVU7 | Positive | 2452813 - 2454129 | 47164.9 |
| vacj family lipoprotein | VSVS12_RS11010 | P43262 | Negative | 2454223 - 2454984 | 28130.0 |
| c-type cytochrome biogenesis protein ccmi | VSVS12_RS11015 | P52223 | Negative | 2455047 - 2456267 | 45105.0 |
| cytochrome c-type biogenesis protein | VSVS12_RS11020 | P0ABM9 | Negative | 2456267 - 2456746 | 18180.7 |
| dsbe family thiol:disulfide interchange protein | VSVS12_RS11025 | Q9KQE9 | Negative | 2456746 - 2457297 | 20671.9 |
| heme lyase ccmf/nrfe family subunit | VSVS12_RS11030 | P45037 | Negative | 2457299 - 2459257 | 72895.0 |
| cytochrome c maturation protein ccme | VSVS12_RS11035 | A7MS55 | Negative | 2459254 - 2459739 | 17599.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



