Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybab/ebfc family nucleoid-associated protein | VSVS12_RS10945 | Q87MQ3 | Negative | 2438449 - 2438778 | 12062.8 |
| dna polymerase iii subunit gamma/tau | VSVS12_RS10950 | P06710 | Negative | 2438944 - 2441109 | 79085.1 |
| adenine phosphoribosyltransferase | VSVS12_RS10955 | A5F2N2 | Negative | 2441122 - 2441667 | 19652.8 |
| yban family protein | VSVS12_RS10960 | P0AAR6 | Negative | 2441817 - 2442182 | 13829.4 |
| hypothetical protein | VSVS12_RS23495 | Not Available | Negative | 2442225 - 2442359 | 5147.32 |
| response regulator | VSVS12_RS10965 | P0AEV2 | Negative | 2442601 - 2443695 | 40582.3 |
| lysr family transcriptional regulator | VSVS12_RS10970 | P76250 | Positive | 2443941 - 2444816 | 33085.8 |
| nad(p)h nitroreductase | VSVS12_RS10975 | P0ACY2 | Negative | 2444908 - 2445456 | 19696.9 |
| fatty acid oxidation complex subunit alpha fadj | VSVS12_RS10980 | Q87MM3 | Negative | 2445603 - 2447717 | 76998.8 |
| acetyl-coa c-acyltransferase fadi | VSVS12_RS10985 | Q87MM2 | Negative | 2447717 - 2449024 | 46225.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



