Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VSVS12_RS10895 | Not Available | Positive | 2428624 - 2428968 | 11873.1 |
| bcct family transporter | VSVS12_RS10900 | D0C9N4 | Positive | 2429091 - 2430974 | 69664.3 |
| mechanosensitive ion channel family protein | VSVS12_RS10905 | Q55717 | Negative | 2431156 - 2432811 | 61837.6 |
| ycgn family cysteine cluster protein | VSVS12_RS10910 | A7MUF3 | Negative | 2433051 - 2433503 | 17474.5 |
| glsb/yeaq/ymge family stress response membrane protein | VSVS12_RS10915 | P64487 | Positive | 2433643 - 2433894 | 8389.61 |
| ykgj family cysteine cluster protein | VSVS12_RS10920 | Q9KT48 | Positive | 2434073 - 2434369 | 10248.3 |
| uracil-dna glycosylase family protein | VSVS12_RS23390 | Not Available | Negative | 2434434 - 2434646 | 7650.23 |
| hypothetical protein | VSVS12_RS10925 | Not Available | Negative | 2434742 - 2436685 | 70199.8 |
| aquaporin z | VSVS12_RS10930 | Q87MQ5 | Positive | 2436856 - 2437554 | 24052.8 |
| recombination mediator recr | VSVS12_RS10940 | Q8DB22 | Negative | 2437833 - 2438432 | 21723.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



