Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-1-phosphate adenylyltransferase | VSVS12_RS10795 | Q87QX6 | Negative | 2408794 - 2410011 | 45436.4 |
| type i dna topoisomerase | VSVS12_RS10800 | Q9KRB2 | Negative | 2410452 - 2413073 | 97765.6 |
| ycin family protein | VSVS12_RS10805 | P0AB63 | Positive | 2413490 - 2413738 | 9480.27 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | VSVS12_RS10810 | Q9KRB0 | Negative | 2414009 - 2415304 | 46076.1 |
| glycine zipper 2tm domain-containing protein | VSVS12_RS10815 | Not Available | Negative | 2415458 - 2415904 | 16554.9 |
| leucyl/phenylalanyl-trna--protein transferase | VSVS12_RS10820 | Q9KRA7 | Positive | 2415923 - 2416639 | 27307.3 |
| arginyltransferase | VSVS12_RS10825 | Q7MJ43 | Positive | 2416641 - 2417339 | 26911.8 |
| translation initiation factor if-1 | VSVS12_RS10830 | A7N1L7 | Positive | 2417421 - 2417639 | 8205.1 |
| thymidine kinase | VSVS12_RS10835 | Q87QJ8 | Negative | 2417710 - 2418288 | 21786.1 |
| cysteine--trna ligase | VSVS12_RS10840 | Q8D8R1 | Negative | 2418390 - 2419772 | 52097.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



