Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trimethylamine-n-oxide reductase tora | VSVS12_RS10600 | Q87QI7 | Negative | 2362963 - 2365425 | 92487.8 |
| pentaheme c-type cytochrome torc | VSVS12_RS10605 | P33226 | Negative | 2365450 - 2366634 | 44050.2 |
| trimethylamine n-oxide reductase system protein tore | VSVS12_RS10610 | Not Available | Negative | 2366685 - 2366864 | 6609.26 |
| abc transporter permease | VSVS12_RS10615 | Q9ZUT3 | Positive | 2367302 - 2368093 | 28430.4 |
| hypothetical protein | VSVS12_RS23220 | Not Available | Positive | 2368285 - 2368461 | 7064.43 |
| formate transporter foca | VSVS12_RS10620 | P0AC25 | Negative | 2368631 - 2369482 | 30837.7 |
| tigr02647 family protein | VSVS12_RS10625 | Not Available | Positive | 2369929 - 2370168 | 8722.39 |
| pace efflux transporter | VSVS12_RS10630 | Q87QJ4 | Negative | 2370250 - 2370678 | 15972.6 |
| lysr family transcriptional regulator | VSVS12_RS10635 | P0DUU5 | Positive | 2370767 - 2371660 | 33670.5 |
| nad-dependent epimerase/dehydratase family protein | VSVS12_RS10640 | Not Available | Positive | 2371674 - 2372495 | 29917.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



