Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-alanine exporter alae | VSVS12_RS10500 | Q9KR19 | Negative | 2343014 - 2343463 | 16454.3 |
| hybrid sensor histidine kinase/response regulator | VSVS12_RS10505 | Q7MD16 | Negative | 2343705 - 2346125 | 89603.0 |
| upf0149 family protein | VSVS12_RS10510 | Not Available | Positive | 2346254 - 2346826 | 21384.2 |
| potassium channel family protein | VSVS12_RS10515 | Q57604 | Negative | 2346948 - 2347979 | 38144.0 |
| quinolinate synthase nada | VSVS12_RS10520 | Q87QT6 | Negative | 2348222 - 2349283 | 38567.4 |
| tol-pal system protein ybgf | VSVS12_RS10525 | P45955 | Negative | 2349414 - 2350187 | 28910.9 |
| peptidoglycan-associated lipoprotein pal | VSVS12_RS10530 | P0A913 | Negative | 2350203 - 2350718 | 18272.5 |
| tol-pal system beta propeller repeat protein tolb | VSVS12_RS10535 | B7VMJ2 | Negative | 2350753 - 2352105 | 49786.5 |
| cell envelope integrity protein tola | VSVS12_RS10540 | Not Available | Negative | 2352121 - 2353206 | 41282.6 |
| exbd/tolr family protein | VSVS12_RS10545 | P50599 | Negative | 2353220 - 2353663 | 15956.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



