Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VSVS12_RS16605 | Not Available | Positive | 353918 - 354358 | 16719.4 |
| cation diffusion facilitator family transporter | VSVS12_RS16610 | Not Available | Positive | 354701 - 355018 | 12637.3 |
| serine dehydratase subunit alpha family protein | VSVS12_RS16615 | Q6LKM4 | Negative | 355122 - 356459 | 46885.5 |
| diguanylate cyclase domain-containing protein | VSVS12_RS16620 | Not Available | Negative | 356774 - 358717 | 73020.2 |
| yfir family protein | VSVS12_RS16625 | Not Available | Negative | 358720 - 359265 | 20342.6 |
| hlyd family efflux transporter periplasmic adaptor subunit | VSVS12_RS16630 | Not Available | Negative | 359279 - 361414 | 80898.9 |
| gyri-like domain-containing protein | VSVS12_RS16635 | Not Available | Negative | 361597 - 362466 | 33375.0 |
| plp-dependent aminotransferase family protein | VSVS12_RS16640 | H3ZPL1 | Positive | 362664 - 363815 | 42496.3 |
| cytochrome b/b6 domain-containing protein | VSVS12_RS16645 | Not Available | Negative | 363885 - 364448 | 20710.7 |
| had family phosphatase | VSVS12_RS16650 | Not Available | Negative | 364693 - 365355 | 25214.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



