Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc finger domain-containing protein | VSVS12_RS10405 | Not Available | Negative | 2320091 - 2321179 | 41327.7 |
| spfh domain-containing protein | VSVS12_RS10410 | O34789 | Negative | 2321183 - 2322313 | 41631.6 |
| yecr family lipoprotein | VSVS12_RS10415 | Not Available | Negative | 2322724 - 2323041 | 11518.8 |
| lipopolysaccharide assembly protein lapb | VSVS12_RS10420 | Not Available | Negative | 2323447 - 2324613 | 44744.4 |
| energy transducer tonb | VSVS12_RS10425 | Not Available | Negative | 2324597 - 2325265 | 24692.1 |
| biopolymer transporter exbd | VSVS12_RS10430 | Q9ZHV9 | Negative | 2325240 - 2325641 | 14587.3 |
| mota/tolq/exbb proton channel family protein | VSVS12_RS10435 | Not Available | Negative | 2325625 - 2326143 | 19546.8 |
| mota/tolq/exbb proton channel family protein | VSVS12_RS10440 | Not Available | Negative | 2326144 - 2327433 | 46756.8 |
| duf3450 domain-containing protein | VSVS12_RS10445 | Not Available | Negative | 2327433 - 2328215 | 29162.9 |
| tonb-dependent siderophore receptor | VSVS12_RS10450 | P31827 | Positive | 2328443 - 2330917 | 92687.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



