Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | VSVS12_RS10355 | Q47456 | Positive | 2310135 - 2310812 | 25588.1 |
| hamp domain-containing sensor histidine kinase | VSVS12_RS10360 | Not Available | Positive | 2310809 - 2312068 | 47134.8 |
| 1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase | VSVS12_RS10365 | Not Available | Positive | 2312181 - 2313074 | 33934.6 |
| duf1496 domain-containing protein | VSVS12_RS10370 | Not Available | Positive | 2313116 - 2313427 | 11436.8 |
| cytochrome-c peroxidase | VSVS12_RS10375 | P37197 | Positive | 2313634 - 2314611 | 36679.9 |
| atp-binding protein | VSVS12_RS10380 | Q8D5Z6 | Positive | 2314604 - 2316982 | 89021.2 |
| hypothetical protein | VSVS12_RS10385 | Not Available | Positive | 2317106 - 2317354 | 9023.89 |
| amidohydrolase | VSVS12_RS10390 | Not Available | Negative | 2317513 - 2318943 | 52159.7 |
| duf2301 domain-containing membrane protein | VSVS12_RS10395 | P43947 | Positive | 2319151 - 2319702 | 20072.0 |
| hypothetical protein | VSVS12_RS10400 | Not Available | Negative | 2319792 - 2320004 | 8061.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



