Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease iii | VSVS12_RS10305 | P0A1B0 | Positive | 2294765 - 2295571 | 31143.9 |
| type i secretion system permease/atpase | VSVS12_RS10310 | Q03024 | Positive | 2295770 - 2297464 | 62484.2 |
| hlyd family type i secretion periplasmic adaptor subunit | VSVS12_RS10315 | Q7ANN5 | Positive | 2297457 - 2298806 | 50371.6 |
| hypothetical protein | VSVS12_RS10320 | Not Available | Positive | 2299016 - 2301982 | 104683.0 |
| enoyl-acp reductase fabv | VSVS12_RS10325 | Q87QB9 | Negative | 2302147 - 2303349 | 43801.2 |
| acyl-coa dehydrogenase | VSVS12_RS10330 | Q8ZBY6 | Negative | 2303546 - 2305855 | 84987.0 |
| tetr/acrr family transcriptional regulator | VSVS12_RS10335 | Not Available | Negative | 2305999 - 2306625 | 23066.8 |
| gtra family protein | VSVS12_RS10340 | Not Available | Negative | 2307112 - 2307540 | 16034.1 |
| glycosyltransferase family 39 protein | VSVS12_RS10345 | A8FRR0 | Negative | 2307537 - 2308946 | 52610.4 |
| glycosyltransferase family 2 protein | VSVS12_RS10350 | Q55487 | Negative | 2308943 - 2309947 | 37392.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



