Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 8-amino-7-oxononanoate synthase | VSVS12_RS10255 | Q9KSZ3 | Negative | 2283980 - 2285122 | 41832.2 |
| biotin synthase biob | VSVS12_RS10260 | A7MX36 | Negative | 2285106 - 2286158 | 39252.2 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | VSVS12_RS10265 | P12995 | Positive | 2286322 - 2287596 | 47070.6 |
| duf2057 family protein | VSVS12_RS10270 | Q8DAS4 | Negative | 2287663 - 2288346 | 24729.5 |
| porin | VSVS12_RS10275 | Not Available | Negative | 2288436 - 2289425 | 36239.1 |
| atp-dependent dna helicase ding | VSVS12_RS10280 | P29741 | Positive | 2289937 - 2292009 | 77729.3 |
| tsup family transporter | VSVS12_RS10285 | P46490 | Positive | 2292084 - 2292863 | 27593.3 |
| primosomal replication protein | VSVS12_RS10290 | Not Available | Positive | 2292860 - 2293408 | 21577.9 |
| pleiotropic regulatory protein rsms | VSVS12_RS10295 | Not Available | Positive | 2293411 - 2293575 | 5754.82 |
| cupin domain-containing protein | VSVS12_RS10300 | P27431 | Positive | 2293587 - 2294726 | 43142.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



