Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | VSVS12_RS10055 | Q8ZNQ3 | Negative | 2245774 - 2246859 | 39639.4 |
| efflux rnd transporter periplasmic adaptor subunit | VSVS12_RS10060 | Not Available | Negative | 2246861 - 2247892 | 37524.9 |
| envelope stress response membrane protein pspc | VSVS12_RS10065 | Not Available | Negative | 2248092 - 2248508 | 15582.9 |
| envelope stress response membrane protein pspb | VSVS12_RS10070 | P0AFN1 | Negative | 2248471 - 2248704 | 9291.28 |
| phage shock protein pspa | VSVS12_RS10075 | P0AFM7 | Negative | 2248789 - 2249457 | 25345.1 |
| phage shock protein operon transcriptional activator | VSVS12_RS10080 | P37344 | Positive | 2249696 - 2250697 | 37941.1 |
| abc transporter substrate-binding protein | VSVS12_RS10085 | P36634 | Positive | 2250891 - 2252510 | 60258.1 |
| abc transporter permease subunit | VSVS12_RS10090 | P0AGH4 | Positive | 2252511 - 2253473 | 35538.4 |
| putrescine export abc transporter permease sapc | VSVS12_RS10095 | P0A2J6 | Positive | 2253460 - 2254347 | 31864.5 |
| oligopeptide/dipeptide abc transporter atp-binding protein | VSVS12_RS10100 | P36636 | Positive | 2254347 - 2255342 | 37416.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



