Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate decarboxylase | VSVS12_RS16555 | Q5E5Y7 | Positive | 344642 - 346036 | 52539.3 |
| trimeric intracellular cation channel family protein | VSVS12_RS16560 | P0AFP1 | Positive | 346150 - 346764 | 22396.1 |
| dinb family protein | VSVS12_RS16565 | Not Available | Positive | 347086 - 347628 | 20778.7 |
| duf6500 family protein | VSVS12_RS16570 | Not Available | Positive | 347670 - 347888 | 8362.06 |
| dmt family transporter | VSVS12_RS16575 | Not Available | Negative | 347921 - 348841 | 32210.7 |
| ybhb/ybcl family raf kinase inhibitor-like protein | VSVS12_RS16580 | Not Available | Positive | 349078 - 349662 | 20574.5 |
| hypothetical protein | VSVS12_RS23435 | Not Available | Positive | 349962 - 350387 | 15309.3 |
| duf2339 domain-containing protein | VSVS12_RS16590 | Not Available | Positive | 350384 - 352717 | 86728.9 |
| helix-turn-helix transcriptional regulator | VSVS12_RS16595 | O31834 | Negative | 352801 - 353019 | 8024.95 |
| duf2975 domain-containing protein | VSVS12_RS16600 | Not Available | Negative | 353029 - 353577 | 20753.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



