Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3015 domain-containing protein | VSVS12_RS09905 | Not Available | Positive | 2211451 - 2211936 | 16522.6 |
| duf4105 domain-containing protein | VSVS12_RS09910 | Not Available | Positive | 2212102 - 2213955 | 70031.4 |
| dna polymerase ii | VSVS12_RS09915 | P21189 | Positive | 2214144 - 2216507 | 90006.6 |
| eal domain-containing protein | VSVS12_RS09920 | P32701 | Negative | 2216493 - 2218541 | 76290.7 |
| nucleotidyltransferase domain-containing protein | VSVS12_RS09925 | Not Available | Negative | 2218763 - 2219530 | 29286.2 |
| elongation factor p-like protein yeip | VSVS12_RS09930 | A7MS04 | Positive | 2219709 - 2220275 | 20911.0 |
| hi1450 family dsdna-mimic protein | VSVS12_RS09935 | A7MRY9 | Positive | 2220278 - 2220598 | 12163.1 |
| integration host factor subunit alpha | VSVS12_RS09940 | B7VPF6 | Negative | 2220736 - 2221032 | 11070.2 |
| response regulator | VSVS12_RS09945 | A7MRY4 | Positive | 2221736 - 2224237 | 93828.0 |
| hypothetical protein | VSVS12_RS09950 | Not Available | Positive | 2224440 - 2224667 | 8808.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



