Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | VSVS12_RS09855 | Not Available | Negative | 2203736 - 2204524 | 29275.1 |
| ggdef domain-containing protein | VSVS12_RS09860 | Q9KKZ4 | Negative | 2204870 - 2206375 | 56594.9 |
| hypothetical protein | VSVS12_RS09865 | Not Available | Negative | 2206405 - 2206911 | 18919.3 |
| Trna-gly | Not Available | Not Available | Positive | 2207273 - 2207348 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2207376 - 2207462 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2207549 - 2207624 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 2207662 - 2207735 | Not Available |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | VSVS12_RS09890 | Q322L9 | Negative | 2207976 - 2208533 | 21337.5 |
| excinuclease abc subunit uvrc | VSVS12_RS09895 | Q87NC4 | Negative | 2208609 - 2210441 | 69255.4 |
| uvry/sira/gaca family response regulator transcription factor | VSVS12_RS09900 | P0AED5 | Negative | 2210441 - 2211085 | 23732.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



