Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sgrr family transcriptional regulator | VSVS12_RS16505 | Q7N125 | Negative | 329216 - 330967 | 66995.8 |
| deda family protein | VSVS12_RS16510 | Not Available | Negative | 331254 - 331871 | 22662.4 |
| putrescine-ornithine antiporter | VSVS12_RS16515 | P0AAF2 | Positive | 332359 - 333675 | 46478.5 |
| arginine decarboxylase | VSVS12_RS16520 | P28629 | Positive | 333739 - 336030 | 86045.1 |
| nadph-dependent fmn reductase | VSVS12_RS16525 | Not Available | Negative | 336208 - 336729 | 18930.3 |
| lysr family transcriptional regulator | VSVS12_RS16530 | P30864 | Positive | 336865 - 337767 | 33436.4 |
| nupc/nupg family nucleoside cnt transporter | VSVS12_RS16535 | Not Available | Negative | 337900 - 339108 | 41995.3 |
| dead/deah box helicase | VSVS12_RS16540 | Not Available | Positive | 339717 - 341270 | 55575.4 |
| putative glutamine/gamma-aminobutyrate antiporter gadc | VSVS12_RS16545 | P37034 | Positive | 342132 - 343652 | 55032.2 |
| glutaminase a | VSVS12_RS16550 | Q83SE1 | Positive | 343667 - 344626 | 33831.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



