Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent malic enzyme | VSVS12_RS09455 | Q87Q92 | Positive | 2117684 - 2119372 | 61913.0 |
| duf3392 domain-containing protein | VSVS12_RS09460 | Not Available | Positive | 2119431 - 2119760 | 12112.2 |
| vancomycin high temperature exclusion protein | VSVS12_RS09465 | P0AFY4 | Positive | 2119760 - 2120542 | 30517.2 |
| ggdef domain-containing protein | VSVS12_RS09470 | Not Available | Negative | 2120671 - 2121984 | 50892.9 |
| duf2797 domain-containing protein | VSVS12_RS09475 | Not Available | Positive | 2122260 - 2123090 | 31084.7 |
| cysteine desulfurase-like protein | VSVS12_RS09480 | A4W9R3 | Negative | 2123200 - 2124438 | 45435.1 |
| 2og-fe dioxygenase family protein | VSVS12_RS09485 | Not Available | Negative | 2124422 - 2125078 | 24626.0 |
| thioredoxin-disulfide reductase | VSVS12_RS09490 | Q9KSS4 | Positive | 2125477 - 2126439 | 34596.0 |
| heme abc transporter permease/atp-binding protein cydd | VSVS12_RS09495 | P29018 | Positive | 2126568 - 2128355 | 65485.8 |
| heme abc transporter atp-binding protein/permease cydc | VSVS12_RS09500 | P23886 | Positive | 2128348 - 2130084 | 63973.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



