Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isl3 family transposase | VSVS12_RS09405 | Q06126 | Positive | 2106973 - 2108166 | 46221.3 |
| hypothetical protein | VSVS12_RS09410 | Not Available | Positive | 2108379 - 2108609 | 8801.11 |
| hypothetical protein | VSVS12_RS09415 | Not Available | Positive | 2108782 - 2109081 | 11450.1 |
| vwa domain-containing protein | VSVS12_RS09420 | Not Available | Negative | 2109169 - 2110161 | 35468.8 |
| is4 family transposase | VSVS12_RS09425 | Not Available | Negative | 2110136 - 2111344 | 45975.1 |
| hypothetical protein | VSVS12_RS23200 | Not Available | Negative | 2111404 - 2111979 | 19923.6 |
| amino acid aminotransferase | VSVS12_RS09435 | P00509 | Positive | 2112356 - 2113546 | 43166.5 |
| outer membrane beta-barrel protein | VSVS12_RS09440 | Not Available | Negative | 2113636 - 2114277 | 23739.0 |
| hypothetical protein | VSVS12_RS09445 | Not Available | Negative | 2114523 - 2114900 | 14434.3 |
| uracil-dna glycosylase family protein | VSVS12_RS09450 | O60231 | Negative | 2115125 - 2117486 | 81732.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



