Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VSVS12_RS09305 | Not Available | Negative | 2084673 - 2084852 | 6922.28 |
| duf2947 domain-containing protein | VSVS12_RS09310 | Not Available | Negative | 2085092 - 2085565 | 18856.0 |
| hd domain-containing protein | VSVS12_RS09315 | Not Available | Negative | 2085579 - 2086166 | 22325.6 |
| ribosomal protein s5-alanine n-acetyltransferase | VSVS12_RS09320 | P0A949 | Negative | 2086166 - 2086750 | 22676.4 |
| transcriptional regulator tyrr | VSVS12_RS09325 | P0A2D8 | Negative | 2086750 - 2088294 | 57878.8 |
| ycjf family protein | VSVS12_RS09330 | A7MYQ5 | Negative | 2088396 - 2089424 | 37168.8 |
| ycjx family protein | VSVS12_RS09335 | P76046 | Negative | 2089421 - 2090797 | 52093.7 |
| hypothetical protein | VSVS12_RS09340 | Not Available | Negative | 2090948 - 2091133 | 6900.83 |
| fumarate hydratase | VSVS12_RS09345 | Q58690 | Negative | 2091317 - 2092837 | 54673.7 |
| aminodeoxychorismate synthase component 1 | VSVS12_RS09350 | P05041 | Positive | 2093016 - 2094398 | 51880.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



