Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VSVS12_RS09255 | Not Available | Negative | 2073966 - 2074352 | 13600.8 |
| duf2982 domain-containing protein | VSVS12_RS09260 | Not Available | Positive | 2074589 - 2075329 | 28598.6 |
| mbl fold metallo-hydrolase | VSVS12_RS09265 | P75849 | Negative | 2075447 - 2076103 | 23821.4 |
| ycbk family protein | VSVS12_RS09270 | P0AB08 | Negative | 2076189 - 2076731 | 20061.9 |
| murein l,d-transpeptidase | VSVS12_RS09275 | P22525 | Negative | 2076941 - 2078479 | 59435.8 |
| duf1513 domain-containing protein | VSVS12_RS09280 | Not Available | Negative | 2078591 - 2079676 | 39485.1 |
| imelysin family protein | VSVS12_RS09285 | Not Available | Negative | 2079666 - 2080691 | 38015.0 |
| di-heme oxidoredictase family protein | VSVS12_RS09290 | Not Available | Negative | 2080715 - 2082109 | 51081.6 |
| imelysin family protein | VSVS12_RS09295 | Not Available | Negative | 2082235 - 2083497 | 45936.1 |
| gtp cyclohydrolase ii | VSVS12_RS09300 | Q87NE7 | Negative | 2083688 - 2084335 | 23980.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



