Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family dna-binding transcriptional regulator | VSVS12_RS09205 | P24242 | Positive | 2063948 - 2064946 | 35825.1 |
| pts sugar transporter subunit iib | VSVS12_RS09210 | Q45399 | Positive | 2065227 - 2065535 | 11214.6 |
| pts sugar transporter subunit iic | VSVS12_RS09215 | P39584 | Positive | 2065556 - 2066896 | 47757.3 |
| pts lactose/cellobiose transporter subunit iia | VSVS12_RS09220 | Not Available | Positive | 2066880 - 2067296 | 15265.2 |
| dihydrodipicolinate synthase | VSVS12_RS09225 | Not Available | Positive | 2067293 - 2068174 | 31670.6 |
| response regulator transcription factor | VSVS12_RS09230 | Q1M7A0 | Negative | 2068342 - 2068977 | 23445.7 |
| cache domain-containing protein | VSVS12_RS09235 | Q1M799 | Negative | 2068970 - 2070325 | 50873.5 |
| trap transporter large permease subunit | VSVS12_RS09240 | Q9HU16 | Negative | 2070454 - 2071737 | 45783.0 |
| trap transporter small permease subunit | VSVS12_RS09245 | Not Available | Negative | 2071748 - 2072281 | 20281.3 |
| trap transporter substrate-binding protein | VSVS12_RS09250 | Not Available | Negative | 2072468 - 2073589 | 41667.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



