Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lssy c-terminal domain-containing protein | VSVS12_RS09150 | Not Available | Negative | 2054271 - 2055569 | 49578.7 |
| glycosyltransferase | VSVS12_RS09155 | Not Available | Negative | 2055589 - 2056323 | 27820.4 |
| 50s ribosomal protein l25 | VSVS12_RS09160 | A7MZG9 | Positive | 2056681 - 2056959 | 10370.7 |
| pilz domain-containing protein | VSVS12_RS09165 | Not Available | Negative | 2057325 - 2057681 | 13827.9 |
| eama family transporter rard | VSVS12_RS09170 | Not Available | Positive | 2057951 - 2058841 | 33134.5 |
| is3 family transposase | VSVS12_RS22635 | Not Available | Positive | 2058958 - 2060195 | 47827.6 |
| hypothetical protein | VSVS12_RS09185 | Not Available | Negative | 2060294 - 2060515 | 8163.49 |
| bifunctional diguanylate cyclase/phosphodiesterase | VSVS12_RS09190 | Q9I310 | Positive | 2060861 - 2062648 | 68239.9 |
| dps family protein | VSVS12_RS09195 | P45173 | Negative | 2062748 - 2063224 | 18335.9 |
| dopa 4,5-dioxygenase family protein | VSVS12_RS09200 | Not Available | Negative | 2063404 - 2063751 | 13707.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



