Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VSVS12_RS09095 | Not Available | Negative | 2044135 - 2044404 | 10911.9 |
| duf2913 family protein | VSVS12_RS09105 | Not Available | Negative | 2044673 - 2045338 | 25179.9 |
| bcr/cfla family multidrug efflux mfs transporter | VSVS12_RS09110 | P28246 | Negative | 2045338 - 2046540 | 42530.3 |
| 16s rrna pseudouridine(516) synthase rsua | VSVS12_RS09115 | Q8D8X2 | Negative | 2046752 - 2047483 | 27570.0 |
| dead/deah box helicase | VSVS12_RS09120 | P33919 | Positive | 2047557 - 2049299 | 66064.1 |
| pepsy domain-containing protein | VSVS12_RS09125 | Not Available | Positive | 2049403 - 2049834 | 16441.4 |
| response regulator transcription factor | VSVS12_RS09130 | Q9HV32 | Positive | 2049839 - 2050498 | 24499.5 |
| atp-binding protein | VSVS12_RS09135 | Q9I0I2 | Positive | 2050488 - 2051828 | 49758.3 |
| sugar efflux transporter | VSVS12_RS09140 | Q9S3K0 | Negative | 2051951 - 2053138 | 43064.0 |
| arac family transcriptional regulator | VSVS12_RS09145 | Not Available | Positive | 2053331 - 2054218 | 34421.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



