Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | VSVS12_RS09045 | O53900 | Negative | 2029440 - 2031893 | 90618.6 |
| abc transporter atp-binding protein | VSVS12_RS09050 | P9WQK0 | Negative | 2031874 - 2032545 | 24750.1 |
| mate family efflux transporter | VSVS12_RS09055 | O07940 | Negative | 2032668 - 2034038 | 49417.1 |
| duf2867 domain-containing protein | VSVS12_RS09060 | P75822 | Positive | 2034182 - 2035606 | 53206.2 |
| eal domain-containing protein | VSVS12_RS09065 | Q8EJM6 | Negative | 2035666 - 2037867 | 82359.1 |
| sodium:alanine symporter family protein | VSVS12_RS09070 | O31464 | Negative | 2038050 - 2039453 | 49807.4 |
| is4 family transposase | VSVS12_RS09075 | Not Available | Positive | 2039552 - 2040760 | 45975.1 |
| glutathione s-transferase | VSVS12_RS09080 | Not Available | Positive | 2041360 - 2042025 | 25986.7 |
| hypothetical protein | VSVS12_RS09085 | Not Available | Negative | 2042104 - 2042805 | 26863.8 |
| is4 family transposase | VSVS12_RS09090 | Not Available | Negative | 2042823 - 2044031 | 45975.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



