Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cina family nicotinamide mononucleotide deamidase-related protein | VSVS12_RS08995 | B1LLK3 | Negative | 2014724 - 2015971 | 45698.9 |
| duf3943 domain-containing protein | VSVS12_RS09000 | Not Available | Positive | 2016149 - 2017042 | 33254.4 |
| glycine cleavage system protein r | VSVS12_RS09005 | Not Available | Positive | 2017269 - 2017781 | 18503.1 |
| carboxynorspermidine decarboxylase | VSVS12_RS09010 | Q56575 | Negative | 2017839 - 2018972 | 41936.8 |
| carboxynorspermidine synthase | VSVS12_RS09015 | P0DPE4 | Negative | 2020016 - 2021260 | 45956.5 |
| pyridoxal phosphate-dependent class iii aminotransferase | VSVS12_RS09020 | Q9Z3R2 | Negative | 2021270 - 2024182 | 105627.0 |
| tolc family outer membrane protein | VSVS12_RS09025 | Not Available | Positive | 2024854 - 2026167 | 48538.0 |
| ompa family protein | VSVS12_RS09030 | P0A3S9 | Positive | 2026167 - 2026790 | 23008.0 |
| na+/h+ antiporter nhaa | VSVS12_RS09035 | Q56725 | Negative | 2026858 - 2028012 | 40718.2 |
| lipocalin-like domain-containing protein | VSVS12_RS09040 | Not Available | Negative | 2028321 - 2029439 | 42050.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



