Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yjji family glycine radical enzyme | VSVS12_RS08940 | P37342 | Negative | 2001184 - 2002725 | 56845.9 |
| methyl-accepting chemotaxis protein | VSVS12_RS08945 | Not Available | Negative | 2002904 - 2004787 | 67835.1 |
| hypothetical protein | VSVS12_RS08950 | Not Available | Negative | 2005038 - 2005292 | 9537.98 |
| lyse family translocator | VSVS12_RS08955 | P0AG36 | Negative | 2005361 - 2005990 | 22576.8 |
| dna topoisomerase (atp-hydrolyzing) subunit a | VSVS12_RS08960 | P37411 | Negative | 2006277 - 2008937 | 97955.1 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | VSVS12_RS08965 | Q87ND5 | Positive | 2009217 - 2009930 | 26453.0 |
| class 1a ribonucleoside-diphosphate reductase subunit alpha | VSVS12_RS08975 | P43754 | Positive | 2010382 - 2012664 | 85529.5 |
| class ia ribonucleoside-diphosphate reductase subunit beta | VSVS12_RS08980 | P69925 | Positive | 2012752 - 2013885 | 43816.8 |
| class i ribonucleotide reductase maintenance protein yfae | VSVS12_RS08985 | Not Available | Positive | 2013885 - 2014163 | 10036.0 |
| 30s ribosomal protein s6 modification protein | VSVS12_RS08990 | Not Available | Negative | 2014291 - 2014539 | 9337.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



