Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | VSVS12_RS08740 | Not Available | Positive | 1955535 - 1956566 | 38885.1 |
| lipopolysaccharide biosynthesis protein | VSVS12_RS08745 | Not Available | Positive | 1956570 - 1958063 | 55861.7 |
| o-antigen ligase family protein | VSVS12_RS08750 | Not Available | Positive | 1958060 - 1959460 | 51201.9 |
| acyltransferase | VSVS12_RS08755 | Not Available | Positive | 1959531 - 1960247 | 26036.4 |
| uracil-dna glycosylase family protein | VSVS12_RS08760 | Not Available | Positive | 1960240 - 1961178 | 34655.1 |
| is4 family transposase | VSVS12_RS08765 | Not Available | Positive | 1961285 - 1962493 | 45975.1 |
| hypothetical protein | VSVS12_RS22985 | Not Available | Positive | 1962490 - 1962690 | 7505.89 |
| gnvr domain-containing protein | VSVS12_RS08770 | Not Available | Positive | 1962687 - 1964126 | 53789.1 |
| glycosyltransferase | VSVS12_RS08775 | D6Z995 | Positive | 1964240 - 1965346 | 40966.4 |
| glycosyltransferase family 2 protein | VSVS12_RS08780 | Not Available | Positive | 1965348 - 1966529 | 44776.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



