Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murr/rpir family transcriptional regulator | VSVS12_RS08690 | A8ADG3 | Positive | 1943220 - 1944065 | 30386.7 |
| dna ligase | VSVS12_RS08695 | P44121 | Negative | 1944073 - 1944939 | 32951.6 |
| stas domain-containing protein | VSVS12_RS08700 | Not Available | Positive | 1945203 - 1945523 | 11924.3 |
| ompa family protein | VSVS12_RS08705 | Not Available | Positive | 1945542 - 1946378 | 31125.2 |
| uracil-dna glycosylase family protein | VSVS12_RS08710 | Not Available | Positive | 1946365 - 1948475 | 76251.0 |
| tyrosine-protein kinase family protein | VSVS12_RS08715 | Not Available | Positive | 1948475 - 1949167 | 25916.2 |
| response regulator | VSVS12_RS08720 | Q9P896 | Positive | 1949188 - 1951491 | 85433.3 |
| sigma-54 dependent transcriptional regulator | VSVS12_RS08725 | Q9KT84 | Positive | 1951527 - 1952996 | 54945.9 |
| glycosyltransferase family 4 protein | VSVS12_RS08730 | Not Available | Positive | 1952974 - 1954041 | 39332.1 |
| glycosyltransferase | VSVS12_RS08735 | Q81ST7 | Positive | 1954164 - 1955378 | 45731.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



