Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase/isomerase family protein | VSVS12_RS08640 | Q1ZXF1 | Negative | 1930771 - 1931583 | 29245.1 |
| lysr family transcriptional regulator | VSVS12_RS08645 | Not Available | Positive | 1931770 - 1932720 | 35722.0 |
| gnat family n-acetyltransferase | VSVS12_RS08650 | Not Available | Negative | 1932900 - 1933385 | 18342.3 |
| dna alkylation repair protein | VSVS12_RS08655 | Not Available | Positive | 1933516 - 1934205 | 26588.0 |
| isl3 family transposase | VSVS12_RS08660 | Not Available | Negative | 1934283 - 1935476 | 46247.4 |
| duf748 domain-containing protein | VSVS12_RS08665 | Not Available | Negative | 1935640 - 1937247 | 58194.0 |
| is4 family transposase | VSVS12_RS08670 | Not Available | Negative | 1937201 - 1938409 | 45975.1 |
| duf748 domain-containing protein | VSVS12_RS08675 | Not Available | Negative | 1938469 - 1940151 | 61279.7 |
| pts n-acetylmuramic acid transporter subunit iibc | VSVS12_RS08680 | Q7MBS2 | Negative | 1940484 - 1941947 | 50990.3 |
| n-acetylmuramic acid 6-phosphate etherase | VSVS12_RS08685 | Q8D4Z4 | Negative | 1942059 - 1942973 | 32085.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



