Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murr/rpir family transcriptional regulator | VSVS12_RS16405 | Not Available | Negative | 307545 - 308192 | 23626.6 |
| pts fructose transporter subunit iic | VSVS12_RS16410 | O31645 | Positive | 308368 - 309771 | 49891.1 |
| glycosyl hydrolase-related protein | VSVS12_RS16415 | P54746 | Positive | 309857 - 312538 | 101030.0 |
| alpha-amylase family glycosyl hydrolase | VSVS12_RS16420 | G0GBS4 | Positive | 312562 - 314268 | 64168.8 |
| fructose pts transporter subunit iia | VSVS12_RS16425 | P54745 | Positive | 314281 - 314883 | 21701.1 |
| mannose-6-phosphate isomerase, class i | VSVS12_RS16430 | P25081 | Positive | 315147 - 316340 | 43805.1 |
| iron-containing alcohol dehydrogenase | VSVS12_RS16435 | P13604 | Negative | 316474 - 317610 | 40992.2 |
| hypothetical protein | VSVS12_RS16440 | Not Available | Negative | 317870 - 318682 | 30433.2 |
| cupin domain-containing protein | VSVS12_RS16445 | Not Available | Negative | 318803 - 319126 | 12156.3 |
| had family hydrolase | VSVS12_RS16450 | Not Available | Negative | 319107 - 319751 | 24538.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



