Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2987 domain-containing protein | VSVS12_RS08345 | Not Available | Negative | 1856104 - 1856763 | 24630.5 |
| glucosaminidase domain-containing protein | VSVS12_RS08350 | Not Available | Negative | 1856763 - 1857590 | 31517.9 |
| hypothetical protein | VSVS12_RS08355 | Not Available | Negative | 1857583 - 1858380 | 29492.0 |
| spermidine/putrescine abc transporter atp-binding protein pota | VSVS12_RS08360 | Q87PH3 | Positive | 1858810 - 1859940 | 42800.4 |
| spermidine/putrescine abc transporter permease potb | VSVS12_RS08365 | P0AFK4 | Positive | 1859924 - 1860781 | 31972.8 |
| spermidine/putrescine abc transporter permease potc | VSVS12_RS08370 | P0AFK8 | Positive | 1860781 - 1861551 | 27975.3 |
| extracellular solute-binding protein | VSVS12_RS08375 | P0AFK9 | Positive | 1861649 - 1862683 | 38351.3 |
| extracellular solute-binding protein | VSVS12_RS08380 | Not Available | Positive | 1862861 - 1863898 | 38685.8 |
| sir2 family nad+-dependent deacetylase | VSVS12_RS08385 | Q87PH8 | Negative | 1864001 - 1864735 | 27076.1 |
| ammonium transporter | VSVS12_RS08390 | Q58739 | Negative | 1864949 - 1866169 | 42565.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



