Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaredoxin family protein | VSVS12_RS08245 | Not Available | Positive | 1836727 - 1836963 | 9005.6 |
| abc transporter atp-binding protein | VSVS12_RS08250 | P43672 | Positive | 1836941 - 1838857 | 72186.0 |
| duf3466 family protein | VSVS12_RS08255 | Not Available | Positive | 1838865 - 1840505 | 58507.6 |
| ribosome modulation factor | VSVS12_RS08260 | C3NQJ0 | Positive | 1840673 - 1840846 | 6758.94 |
| bifunctional 3-hydroxydecanoyl-acp dehydratase/trans-2-decenoyl-acp isomerase | VSVS12_RS08265 | A5F850 | Negative | 1840977 - 1841495 | 19052.3 |
| lon protease family protein | VSVS12_RS08270 | P75867 | Negative | 1841566 - 1843209 | 60995.7 |
| macrodomain ter protein matp | VSVS12_RS08275 | Q7MKW4 | Positive | 1843395 - 1843844 | 17605.0 |
| duf3634 family protein | VSVS12_RS08280 | Not Available | Positive | 1843858 - 1844166 | 11687.5 |
| hypothetical protein | VSVS12_RS08285 | Not Available | Negative | 1845313 - 1845669 | 13711.4 |
| cytochrome-c oxidase, cbb3-type subunit i | VSVS12_RS08290 | D9IA43 | Positive | 1845930 - 1847357 | 53383.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



