Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase | VSVS12_RS08150 | B0BTC2 | Positive | 1806944 - 1807879 | 35170.4 |
| yajq family cyclic di-gmp-binding protein | VSVS12_RS08155 | P59562 | Negative | 1807942 - 1808427 | 18255.7 |
| 3-deoxy-7-phosphoheptulonate synthase | VSVS12_RS08160 | P00887 | Negative | 1808449 - 1809504 | 38827.4 |
| paai family thioesterase | VSVS12_RS08165 | Not Available | Positive | 1809753 - 1810232 | 17735.8 |
| hypothetical protein | VSVS12_RS08170 | Not Available | Negative | 1810229 - 1811599 | 53801.5 |
| s1 rna-binding domain-containing protein | VSVS12_RS08175 | Not Available | Positive | 1811700 - 1812533 | 30566.9 |
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | VSVS12_RS08180 | B7VNJ8 | Negative | 1812710 - 1814131 | 52596.9 |
| mlad family protein | VSVS12_RS08185 | P76272 | Negative | 1814274 - 1816907 | 95935.5 |
| paraquat-inducible protein a | VSVS12_RS08190 | P0AD04 | Negative | 1816900 - 1818192 | 48370.9 |
| abc transporter atp-binding protein | VSVS12_RS08195 | P45861 | Negative | 1818223 - 1820019 | 66746.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



