Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ig-like domain-containing protein | VSVS12_RS08100 | Not Available | Positive | 1795318 - 1797495 | 77239.0 |
| class i sam-dependent methyltransferase | VSVS12_RS08105 | A7MZM6 | Negative | 1797603 - 1798796 | 44272.0 |
| methyl-accepting chemotaxis protein | VSVS12_RS08110 | Not Available | Negative | 1798909 - 1800312 | 50442.9 |
| acylphosphatase | VSVS12_RS08115 | Q87P91 | Positive | 1800397 - 1800669 | 10101.3 |
| tuse/dsrc/dsvc family sulfur relay protein | VSVS12_RS08120 | Q6D6C3 | Negative | 1800726 - 1801055 | 12299.9 |
| bax inhibitor-1/ycca family protein | VSVS12_RS08125 | Q9KSA1 | Negative | 1801170 - 1801838 | 23756.8 |
| uracil-dna glycosylase family protein | VSVS12_RS08130 | P45769 | Negative | 1802167 - 1802915 | 28311.8 |
| amino acid abc transporter permease | VSVS12_RS08135 | P45768 | Negative | 1802932 - 1804029 | 40798.5 |
| amino acid abc transporter permease | VSVS12_RS08140 | Not Available | Negative | 1804031 - 1805227 | 43227.7 |
| amino acid abc transporter substrate-binding protein | VSVS12_RS08145 | Q52812 | Negative | 1805351 - 1806379 | 36775.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



