Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | VSVS12_RS08050 | Not Available | Positive | 1780103 - 1780519 | 16160.2 |
| nudix domain-containing protein | VSVS12_RS08055 | Not Available | Positive | 1780516 - 1781934 | 52801.6 |
| methyl-accepting chemotaxis protein | VSVS12_RS08060 | Q88KP1 | Negative | 1781987 - 1783627 | 59416.2 |
| 7-carboxy-7-deazaguanine synthase quee | VSVS12_RS08065 | P64555 | Positive | 1783961 - 1784626 | 24490.4 |
| 7-cyano-7-deazaguanine synthase quec | VSVS12_RS08070 | A7MW43 | Positive | 1784640 - 1785335 | 25507.6 |
| ggdef domain-containing protein | VSVS12_RS08075 | Q8XB92 | Negative | 1785343 - 1787268 | 72579.0 |
| duf2750 domain-containing protein | VSVS12_RS08080 | Not Available | Negative | 1787469 - 1787819 | 13256.4 |
| ompa family protein | VSVS12_RS08085 | P22263 | Negative | 1787921 - 1788532 | 22580.6 |
| tolc family outer membrane protein | VSVS12_RS08090 | Not Available | Negative | 1788534 - 1789841 | 48107.4 |
| cadherin-like domain-containing protein | VSVS12_RS23375 | Not Available | Positive | 1790264 - 1795018 | 166746.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



