Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m48 family metallopeptidase | VSVS12_RS08000 | P42597 | Positive | 1767449 - 1767943 | 19465.8 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | VSVS12_RS08005 | C3LMU1 | Positive | 1767954 - 1769111 | 42706.9 |
| type iv pilus biogenesis/stability protein pilw | VSVS12_RS08010 | P43988 | Negative | 1769211 - 1769972 | 28840.7 |
| homoserine o-succinyltransferase | VSVS12_RS08015 | B7VPB2 | Negative | 1770156 - 1771097 | 36441.1 |
| atp-binding protein | VSVS12_RS08020 | Q3V2Q8 | Positive | 1771227 - 1771604 | 14375.1 |
| abc transporter permease | VSVS12_RS08025 | Not Available | Negative | 1771711 - 1772853 | 42024.9 |
| abc transporter permease | VSVS12_RS08030 | Not Available | Negative | 1772850 - 1773998 | 42576.4 |
| hlyd family secretion protein | VSVS12_RS08035 | P94851 | Negative | 1773998 - 1774972 | 35775.3 |
| tolc family protein | VSVS12_RS08040 | Not Available | Negative | 1774982 - 1776379 | 50976.5 |
| hd domain-containing phosphohydrolase | VSVS12_RS08045 | Not Available | Positive | 1776678 - 1779818 | 119053.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



