Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vitamin b12 abc transporter permease btuc | VSVS12_RS07950 | Q87Q39 | Positive | 1758463 - 1759458 | 35690.5 |
| vitamin b12 abc transporter atp-binding protein btud | VSVS12_RS07955 | A5F1V0 | Positive | 1759445 - 1760200 | 27482.4 |
| gnat family n-acetyltransferase | VSVS12_RS07960 | Not Available | Negative | 1760235 - 1760747 | 19379.0 |
| nucleoside triphosphate pyrophosphohydrolase family protein | VSVS12_RS07965 | Not Available | Negative | 1760834 - 1761409 | 21532.6 |
| duf1415 domain-containing protein | VSVS12_RS07970 | Not Available | Negative | 1761558 - 1762124 | 21550.5 |
| mfs transporter | VSVS12_RS07975 | Not Available | Negative | 1762181 - 1763389 | 44324.8 |
| lysr family transcriptional regulator | VSVS12_RS07980 | P39592 | Positive | 1763489 - 1764385 | 34033.1 |
| nramp family divalent metal transporter | VSVS12_RS07985 | P42964 | Negative | 1764446 - 1765675 | 42921.5 |
| arginase family protein | VSVS12_RS07990 | Q1E180 | Positive | 1766090 - 1767013 | 34722.5 |
| glutaredoxin family protein | VSVS12_RS07995 | Not Available | Negative | 1767082 - 1767309 | 8796.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



