Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiopurine s-methyltransferase | VSVS12_RS07850 | A7MVH9 | Positive | 1737709 - 1738356 | 24657.4 |
| formate-dependent phosphoribosylglycinamide formyltransferase | VSVS12_RS07855 | Q87Q53 | Negative | 1738433 - 1739608 | 42153.5 |
| dass family sodium-coupled anion symporter | VSVS12_RS07860 | Q49YW0 | Positive | 1739851 - 1741269 | 51104.8 |
| atp-binding protein | VSVS12_RS07865 | Q02482 | Positive | 1741273 - 1742595 | 48993.5 |
| response regulator | VSVS12_RS07870 | P26408 | Positive | 1742597 - 1743070 | 17793.2 |
| hd-gyp domain-containing protein | VSVS12_RS07875 | Q9HWS0 | Positive | 1743342 - 1744553 | 45055.4 |
| cytidine deaminase | VSVS12_RS07880 | B7VPF1 | Negative | 1744662 - 1745549 | 31932.0 |
| cidb/lrgb family autolysis modulator | VSVS12_RS07885 | P0AD19 | Negative | 1745737 - 1746414 | 24420.8 |
| cida/lrga family protein | VSVS12_RS07890 | C3LLS9 | Negative | 1746414 - 1746779 | 13006.8 |
| exodeoxyribonuclease i | VSVS12_RS07895 | P04995 | Negative | 1746823 - 1748247 | 54756.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



