Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | VSVS12_RS07800 | Not Available | Positive | 1726715 - 1727155 | 16884.5 |
| outer membrane protein | VSVS12_RS07805 | Not Available | Positive | 1727464 - 1728087 | 22906.4 |
| histidine ammonia-lyase | VSVS12_RS07810 | Q9KSQ4 | Negative | 1728162 - 1729694 | 54780.8 |
| urocanate hydratase | VSVS12_RS07815 | Q7MK59 | Negative | 1729697 - 1731391 | 61890.8 |
| formimidoylglutamase | VSVS12_RS07820 | Q8DA19 | Negative | 1731412 - 1732410 | 36913.8 |
| imidazolonepropionase | VSVS12_RS07825 | A5F1X8 | Negative | 1732403 - 1733674 | 46073.3 |
| histidine utilization repressor | VSVS12_RS07830 | P22773 | Negative | 1733777 - 1734490 | 27116.6 |
| sporulation protein | VSVS12_RS07835 | P71088 | Positive | 1734739 - 1735482 | 27172.5 |
| duf3187 family protein | VSVS12_RS07840 | Not Available | Negative | 1735493 - 1736467 | 37597.5 |
| rela/spot domain-containing protein | VSVS12_RS07845 | Not Available | Negative | 1736601 - 1737377 | 28930.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



