Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | VSVS12_RS07700 | Not Available | Negative | 1705619 - 1707349 | 63414.4 |
| tolc family protein | VSVS12_RS07705 | Not Available | Negative | 1707360 - 1708775 | 51866.3 |
| hypothetical protein | VSVS12_RS07710 | Not Available | Negative | 1708883 - 1709281 | 14513.6 |
| m20/m25/m40 family metallo-hydrolase | VSVS12_RS07715 | P54542 | Negative | 1709414 - 1710520 | 39430.9 |
| 4-hydroxyphenylpyruvate dioxygenase | VSVS12_RS07720 | O06695 | Positive | 1710850 - 1711923 | 40583.9 |
| homogentisate 1,2-dioxygenase | VSVS12_RS07725 | Q9KSB4 | Positive | 1711916 - 1713046 | 42633.1 |
| fumarylacetoacetate hydrolase family protein | VSVS12_RS07730 | Not Available | Positive | 1713074 - 1714081 | 36913.9 |
| maleylacetoacetate isomerase | VSVS12_RS07735 | Q9KSB2 | Positive | 1714081 - 1714731 | 24724.0 |
| hypothetical protein | VSVS12_RS07740 | Not Available | Negative | 1714810 - 1714995 | 7084.56 |
| j domain-containing protein | VSVS12_RS07745 | Not Available | Negative | 1715164 - 1716204 | 39130.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



