Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VSVS12_RS07655 | Not Available | Negative | 1696039 - 1696551 | 19293.6 |
| lysine exporter lyso family protein | VSVS12_RS07660 | P75826 | Negative | 1696639 - 1697544 | 31980.6 |
| hdod domain-containing protein | VSVS12_RS07665 | Not Available | Negative | 1697561 - 1698481 | 34609.6 |
| uracil-dna glycosylase family protein | VSVS12_RS22595 | Not Available | Positive | 1698845 - 1698952 | 4189.06 |
| is4 family transposase | VSVS12_RS07670 | Not Available | Negative | 1698965 - 1700173 | 45975.1 |
| uracil-dna glycosylase family protein | VSVS12_RS07675 | Q5E6F5 | Positive | 1700282 - 1700770 | 18621.4 |
| ribosome recycling factor family protein | VSVS12_RS07680 | Not Available | Positive | 1700883 - 1701272 | 14663.0 |
| voc family protein | VSVS12_RS07685 | Not Available | Positive | 1701447 - 1701875 | 16922.6 |
| copper-binding protein | VSVS12_RS07690 | Not Available | Negative | 1701971 - 1702462 | 18267.2 |
| efflux rnd transporter permease subunit | VSVS12_RS07695 | P38054 | Negative | 1702473 - 1705622 | 114938.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



