Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ig-like domain-containing protein | VSVS12_RS07605 | Not Available | Positive | 1677622 - 1684470 | 244720.0 |
| hypothetical protein | VSVS12_RS07610 | Not Available | Positive | 1684618 - 1685322 | 25137.2 |
| duf4250 domain-containing protein | VSVS12_RS07615 | Not Available | Positive | 1685449 - 1685649 | 7653.14 |
| lysr substrate-binding domain-containing protein | VSVS12_RS07620 | P0A2Q5 | Negative | 1685736 - 1686647 | 33929.1 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | VSVS12_RS07625 | Q87NA1 | Positive | 1686935 - 1689217 | 84812.7 |
| aspartate:alanine antiporter | VSVS12_RS07630 | Q87QB8 | Negative | 1689304 - 1690986 | 60490.1 |
| grxa family glutaredoxin | VSVS12_RS07635 | Q9KSW0 | Negative | 1691196 - 1691462 | 9994.87 |
| iron-containing alcohol dehydrogenase | VSVS12_RS07640 | A0A0S1X9S7 | Positive | 1691712 - 1692965 | 45025.6 |
| murr/rpir family transcriptional regulator | VSVS12_RS07645 | P46118 | Negative | 1693051 - 1693905 | 31470.8 |
| pyridoxal-dependent aspartate 1-decarboxylase panp | VSVS12_RS07650 | Q5E6F9 | Negative | 1694197 - 1695837 | 61213.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



