Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:alanine symporter family protein | VSVS12_RS07560 | P44917 | Negative | 1665312 - 1666682 | 48270.0 |
| 50s ribosome-binding protein yggl | VSVS12_RS07565 | Not Available | Negative | 1667351 - 1667692 | 13023.5 |
| hypothetical protein | VSVS12_RS23180 | Not Available | Positive | 1667921 - 1668079 | 6081.91 |
| chromosome partitioning protein para | VSVS12_RS07570 | Not Available | Positive | 1668097 - 1668837 | 28234.3 |
| hypothetical protein | VSVS12_RS07575 | Not Available | Negative | 1668938 - 1669483 | 19645.0 |
| response regulator | VSVS12_RS07580 | Not Available | Negative | 1669666 - 1670163 | 18786.2 |
| atp-binding protein | VSVS12_RS07585 | Not Available | Negative | 1670182 - 1672110 | 72531.4 |
| duf945 family protein | VSVS12_RS07590 | Not Available | Positive | 1672341 - 1673609 | 46382.2 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | VSVS12_RS07595 | Q87QA3 | Positive | 1673751 - 1674833 | 39733.2 |
| ygiq family radical sam protein | VSVS12_RS07600 | Q87N95 | Negative | 1674943 - 1677351 | 89925.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



