Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor sigz | VSVS12_RS16305 | O05409 | Positive | 291163 - 291735 | 21801.6 |
| methyl-accepting chemotaxis protein | VSVS12_RS16310 | Q88R14 | Negative | 291815 - 293728 | 69024.4 |
| voc family protein | VSVS12_RS16315 | Not Available | Positive | 294139 - 294567 | 15492.2 |
| hypothetical protein | VSVS12_RS16320 | Not Available | Negative | 294627 - 294941 | 12085.7 |
| helix-turn-helix transcriptional regulator | VSVS12_RS16325 | Not Available | Positive | 295082 - 295399 | 11862.9 |
| gfa family protein | VSVS12_RS16330 | Not Available | Positive | 295551 - 295964 | 15080.1 |
| methyl-accepting chemotaxis protein | VSVS12_RS16335 | Not Available | Negative | 296066 - 298159 | 74721.8 |
| polc-type dna polymerase iii | VSVS12_RS16340 | Q5HPS7 | Positive | 298600 - 299211 | 22795.3 |
| nifb/nifx family molybdenum-iron cluster-binding protein | VSVS12_RS16345 | Not Available | Positive | 299337 - 299795 | 16627.5 |
| (na+)-nqr maturation nqrm | VSVS12_RS16350 | Not Available | Positive | 299792 - 299989 | 7166.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



