Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VSVS12_RS23370 | Not Available | Positive | 1631402 - 1632220 | 29370.5 |
| hypothetical protein | VSVS12_RS07460 | Not Available | Positive | 1632230 - 1632823 | 20388.1 |
| transglycosylase slt domain-containing protein | VSVS12_RS07465 | Q57K03 | Positive | 1632842 - 1633963 | 42051.6 |
| lpp20 family lipoprotein | VSVS12_RS07470 | Not Available | Positive | 1633947 - 1634912 | 35634.7 |
| fad-dependent oxidoreductase | VSVS12_RS07475 | A6U077 | Negative | 1635011 - 1636669 | 60129.2 |
| chromosome condensation regulator rcc1 | VSVS12_RS07480 | Not Available | Positive | 1636944 - 1638362 | 53124.6 |
| hypothetical protein | VSVS12_RS07485 | Not Available | Positive | 1638511 - 1639218 | 27067.1 |
| vcbs domain-containing protein | VSVS12_RS22970 | Not Available | Negative | 1639289 - 1648846 | 331165.0 |
| methyl-accepting chemotaxis protein | VSVS12_RS07500 | A5W2C8 | Positive | 1649683 - 1651308 | 59301.4 |
| glycosyl hydrolase family 18 protein | VSVS12_RS07505 | P20533 | Positive | 1651770 - 1654115 | 84540.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



