Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hsp20 family protein | VSVS12_RS07310 | B5XT60 | Negative | 1584637 - 1585056 | 15823.9 |
| gtpase hflx | VSVS12_RS07315 | A9H253 | Positive | 1585656 - 1587038 | 51737.9 |
| efflux rnd transporter permease subunit | VSVS12_RS07320 | Not Available | Negative | 1587106 - 1590168 | 111640.0 |
| efflux rnd transporter periplasmic adaptor subunit | VSVS12_RS07325 | Not Available | Negative | 1590202 - 1591260 | 38103.6 |
| permease | VSVS12_RS07330 | I6YET7 | Positive | 1591700 - 1592947 | 45856.1 |
| sdr family nad(p)-dependent oxidoreductase | VSVS12_RS07335 | G9FRD7 | Positive | 1593008 - 1593853 | 30287.9 |
| is4 family transposase | VSVS12_RS07340 | Not Available | Negative | 1593906 - 1595237 | 51556.0 |
| toxin-antitoxin system ywqk family antitoxin | VSVS12_RS07345 | Not Available | Negative | 1595387 - 1597696 | 88719.2 |
| 5'-methylthioadenosine/adenosylhomocysteine nucleosidase | VSVS12_RS07350 | Q9KDD4 | Positive | 1598050 - 1598802 | 26857.4 |
| hypothetical protein | VSVS12_RS07355 | Not Available | Negative | 1598881 - 1600623 | 66923.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



