Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VSVS12_RS07155 | Not Available | Negative | 1551396 - 1552340 | 35519.9 |
| duf3087 domain-containing protein | VSVS12_RS07160 | Not Available | Positive | 1552564 - 1553070 | 19120.4 |
| hypothetical protein | VSVS12_RS07165 | Not Available | Positive | 1553091 - 1554299 | 46524.4 |
| hypothetical protein | VSVS12_RS07170 | Not Available | Positive | 1554339 - 1554572 | 8671.44 |
| is4 family transposase | VSVS12_RS07175 | Not Available | Negative | 1554582 - 1555790 | 45975.1 |
| hypothetical protein | VSVS12_RS07180 | Not Available | Positive | 1555842 - 1556996 | 45768.3 |
| pseudouridine synthase | VSVS12_RS07185 | Q9KRK5 | Positive | 1557267 - 1557962 | 26272.6 |
| n-acetylmuramic acid 6-phosphate etherase | VSVS12_RS07190 | Q0I1F8 | Positive | 1558246 - 1559145 | 32066.2 |
| pts transporter subunit eiic | VSVS12_RS07195 | Q797S1 | Positive | 1559150 - 1560505 | 47085.0 |
| murr/rpir family transcriptional regulator | VSVS12_RS07200 | P46117 | Positive | 1560608 - 1561459 | 31075.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



